Thank you for your reply. I am trying to install amber 24 in Ubuntu 24.
Thanks a lot.
On Mon, 16 Sept 2024, 9:37 pm Li, Zhen, <lizhen6.chemistry.msu.edu> wrote:
> Hi Dulal,
>
>
>
> I am a bit confused by two errors:
>
>
>
> In the first email the CMakErros file says “windows.h” cannot be found,
> which could be caused by many factors according to this thread
> http://archive.ambermd.org/202212/0096.html Maybe starting a fresh AMBER
> installation is a good idea. You are not installing AMBER on Windows right?
> The platform should be WSL, at least, I assume.
>
>
>
> In the latest email the error became “another kmmd exists”. I just checked
> my “AmberTools/src” directory and I only have one “kmmd” target there.
> Again, I suspect that the directory is not clean. Maybe other experts in
> kernel machine MD can give further insights.
>
>
>
> At this point, if your disk space allows, I would recommend starting a
> fresh AMBER installation (serial first, then MPI, then CUDA) to see whether
> the error will disappear. Sorry I wish I could give better helps.
>
>
>
> Best regards,
>
> Zhen.
>
>
>
> *From: *Dulal Mondal via AMBER <amber.ambermd.org>
> *Date: *Monday, September 16, 2024 at 5:17 AM
> *To: *David A Case <dacase1.gmail.com>, AMBER Mailing List <
> amber.ambermd.org>
> *Subject: *Re: [AMBER] amber24 (cuda) installation compilation error
>
> Dear Expert,
> Thank you sir for your reply.
> I think incomplete compilation occurs due to the following error message.
>
>
>
>
>
> *CMake Error at AmberTools/src/kmmd/CMakeLists.txt:15 (add_library):
> add_library cannot create target "kmmd" because another target with the
> same name already exists. The existing target is an interface library
> created in source directory "/home/srabani/Downloads/amber24_src". See
> documentation for policy CMP0002 for more details.*
>
> *I also uploaded the cmake.log file.*
>
> *Thanking you*
>
> On Mon, Sep 16, 2024 at 7:58 AM David A Case <dacase1.gmail.com> wrote:
>
> > On Thu, Sep 12, 2024, Dulal Mondal wrote:
> >
> > >Thank you for your response. Now my run_cmake file is like below.
> > > cmake $AMBER_PREFIX/amber24_src \
> > > -DCMAKE_INSTALL_PREFIX=$AMBER_PREFIX/amber24 \
> > > -DCOMPILER=GNU \
> > > -DMPI=FALSE -DCUDA=TRUE -DINSTALL_TESTS=TRUE
> > >*-DCUDA_TOOLKIT_ROOT_DIR=/home/srabani/cuda* \
> > > -DDOWNLOAD_MINICONDA=FALSE \
> > > 2>&1 | tee cmake.log
> > >But it is still incomplete for compilation.
> > >I also attached the cmake log file.
> > >
> >
> > Here was the request:
> >
> > >> Please search for "CMake Error" in your cmake.log file. That should
> get
> > >> your pointed in the right direction. If you can't figure it out,
> attach
> > >> the cmake.log file (and describe the error) in a follow-up email.
> >
> > We really need to see (at a minimum) the "cmake.log" file. But also
> search
> > for the error message there, and include it in the text of your email.
> > You need to do your part to make it easy for someone to reply.
> >
> > ...dac
> >
> >
>
> --
> *With regards,*
> *Dulal Mondal,*
> *Research Scholar,*
> *Department of Chemistry,*
> *IIT Kharagpur, Kharagpur 721302.*
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Sep 16 2024 - 09:30:03 PDT
