hi
Just reporting that I don't get any issue on RockyLinux9.4
container with cuda 12.4.
Apptainer> rpm -q gcc openmpi cmake
gcc-11.4.1-3.el9.x86_64
openmpi-4.1.1-7.el9.x86_64
cmake-3.26.5-2.el9.x86_64
commands:
# mpi
unset module || :
. /etc/profile.d/modules.sh
module use /usr/share/modulefiles/
module add mpi/openmpi-x86_64
# cuda
PATH=/usr/local/cuda/bin:/usr/local/bin:$PATH
export PATH
mkdir -p /dev/shm/20240715/
tar -C /dev/shm/20240715/ -xjf AmberTools24.tar.bz2 && tar -C /dev/shm/20240715/ -xjf Amber24.tar.bz2
cd /dev/shm/20240715/
cd amber24_src/build/
/usr/libexec/platform-python ./update_amber --update
cd build/
./run_cmake && make install
Maybe it has been fixed with gcc 14.1.1?
Tru
--
Tru Huynh (PhD) | mailto:tru.pasteur.fr | tel +33 1 45 68 87 37
https://research.pasteur.fr/en/team/structural-bioinformatics/
Institut Pasteur, 25-28 rue du Docteur Roux, 75724 Paris CEDEX 15 France
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Received on Mon Jul 15 2024 - 08:00:02 PDT
