Hello amber friends,
I am currently running a membrane simulation for the first time, and I am having a hard time with the imaging. I am running a DOPC: DOPG membrane, the simulation has a drug molecule 6 Armstrong's away from the membrane surface and then goes through the membrane. I have tried auto imaging, I have tried anchoring the residue number corresponding to the the lipids ad nothing works my drug seems to end on the edge of the box always.
Can someone offer advise on how to image my system please?
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Received on Fri Feb 23 2024 - 17:30:02 PST
