Veronica,
cpptraj contains that analysis feature.
See the Amber23 manual, subsection 35.11.75 ("secstruct") for details.
Best,
Anselm
Bioinformatik | NHR.FAU
Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU)
Germany
Am 11.12.2023 um 11:31 schrieb VERONICA MARTIN HERNANDEZ via AMBER:
> Hi everyone
>
> I have done multiple dynamics, and I am interest in seeing if the secondary structure of the protein changes along the dynamics regarding the original. Is there a way to do this and, if so, how can I do that?
>
> Best regards and thanks in advance
> Verónica Martín
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Received on Mon Dec 11 2023 - 03:30:03 PST
