I unfortunately do not have an answer to this, but want to post that I am
also experiencing the same thing. I used similar installation commands on a
Mac OS Ventura (Intel) and can also not seem to correctly install nab. My
installation does not give any errors, but once it is complete, it's clear
nab is not where it's supposed to be, all other modules (ie leap,
antechamber ect) are installed correctly. I hope someone can lend us some
guidance!
Claire
On Tue, Sep 19, 2023 at 8:27 AM Fadaei Fatemeh Mgr. via AMBER <
amber.ambermd.org> wrote:
>
> I am writing to seek assistance with an issue I have encountered while
> using AmberTools23 on my Ubuntu 23.04 system. Specifically, I am
> experiencing problems with the 'nab' command, which does not seem to work
> as expected.
> Here are the steps I followed for installation:
> conda create --name AmberTools23
> conda activate AmberTools23
> conda install -c conda-forge ambertools=23
> After successfully activating the environment, I try to use 'nab'. The
> system reports that the 'nab' command is not found, and when I run 'which
> nab', it does not produce any output.However, both 'tleap' and
> 'antechamber' work.
> My objective is to use 'nab' to construct different shapes of DNA, and I
> would greatly appreciate any guidance or assistance you can provide to
> resolve this issue .
> Best regards,
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
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Received on Tue Sep 19 2023 - 14:30:02 PDT
