[AMBER] »Ø¸´: extracting a frame from trajectory at a specific time

From: Huang ZiJian via AMBER <amber.ambermd.org>
Date: Mon, 11 Sep 2023 01:54:27 +0000

Hi,

e.g. If you want to extract the third frame:
parm a.top
trajin a.nc 3 3

Perhaps it works for you.

Regrads,
Zijian
________________________________
·¢¼þÈË: James Kress via AMBER <amber.ambermd.org>
·¢ËÍʱ¼ä: 2023Äê9ÔÂ11ÈÕ 9:39
ÊÕ¼þÈË: 'AMBER Mailing List' <amber.ambermd.org>
Ö÷Ìâ: [AMBER] extracting a frame from trajectory at a specific time

Amber users,

I have a trajectory file in netcdf format. I know the time in the
simulation (e.g. 561140 ps) at which I want to extract a frame.

I have tried to do this with all the cpptraj commands I could get from the
documentation but an unable to get the correct frame.

Is there a way to do this? Is there an example in the documentation that
shows how to do this?

Thanks for any help anyone can provide.

Jim Kress


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Received on Sun Sep 10 2023 - 19:00:02 PDT
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