Re: [AMBER] issue with pdb4amber

From: Hai Nguyen via AMBER <amber.ambermd.org>
Date: Tue, 11 Apr 2023 14:22:07 -0400

Please search the old thread(s). There are some solutions posted.

Hai

On Tue, Apr 11, 2023 at 2:19 PM Andriy Kovalenko via AMBER <
amber.ambermd.org> wrote:

> Hello,
>
> I have installed AmberTools from Amber22 (the latest version) on my Dell
> Ubuntu Linux desktop.
>
> When running the *pdb4amber* part, I get an error message:
>
> ~/amber22/bin$ ./pdb4amber -i alanine-dipeptide_noHydrogen.pdb -o
> alanine-dipeptide__amber.pdb
> Traceback (most recent call last):
> File "/home/andriy/amber22/bin/./pdb4amber", line 33, in <module>
> sys.exit(load_entry_point('pdb4amber==22.0', 'console_scripts',
> 'pdb4amber')())
> File "/home/andriy/amber22/bin/./pdb4amber", line 22, in
> importlib_load_entry_point
> for entry_point in distribution(dist_name).entry_points
> File
>
> "/home/andriy/amber22/miniconda/lib/python3.10/importlib/metadata/__init__.py",
> line 969, in distribution
> return Distribution.from_name(distribution_name)
> File
>
> "/home/andriy/amber22/miniconda/lib/python3.10/importlib/metadata/__init__.py",
> line 548, in from_name
> raise PackageNotFoundError(name)
> importlib.metadata.PackageNotFoundError: No package metadata was found for
> pdb4amber
>
> Please advise how to resolve this issue.
>
> Thank you,
>
>
> Dr. Andriy Kovalenko
>
> Adjunct Professor
> Department of Biological Sciences
> University of Alberta
> CW 405, Biological Sciences Bldg.
> Edmonton, Alberta, Canada T6G 2E9
>
> Tel: 780-940-7477 (cell)
>
> e-mail: andriy.kovalenko.ualberta.ca
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
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Received on Tue Apr 11 2023 - 11:30:02 PDT
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