[AMBER] Antechamber preparation of the system docked to two identical ligands

From: Enrico Martinez via AMBER <amber.ambermd.org>
Date: Tue, 21 Mar 2023 17:00:10 +0100

Dear Amber Users !

I have an issue related to the preparation of the system containing two
identical ligands present in two different binding sites. Actually when I
try to copy the both units for the parametrization using Antechamber it
says that it could not process two residues at the same time.

Is there any preparation trick for such a case assuming that everything
works fine with the same system containing only one ligand ?

Many thanks in advance

Enrico
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Received on Tue Mar 21 2023 - 09:30:03 PDT
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