Re: [AMBER] life time calculation

From: Daniel Roe via AMBER <amber.ambermd.org>
Date: Mon, 20 Mar 2023 15:00:50 -0400

Hi,

Assuming the data you want is in column 2 of a "standard" data file,
e.g. something that looks like:

#Frame GLU_13.O-VAL_2.N-H
1 1
2 0
...

You can do something like:

readdata mydata.dat
runanalysis lifetime mydata.dat:2 ...

See the manual for all keywords for the 'lifetime' command.

-Dan

On Mon, Mar 20, 2023 at 2:47 PM Dulal Mondal via AMBER
<amber.ambermd.org> wrote:
>
> Dear Experts,
>
> I have generated a time series data set externally which contains 0 and 1
> at different frames. I read the data set in cpptraj using the "readdata"
> command. My question is how can I calculate lifetime?
>
> Thanking you
>
>
>
> --
> *With regards,*
> *Dulal Mondal,*
> *Research Scholar,*
> *Department of Chemistry,*
> *IIT Kharagpur, Kharagpur 721302.*
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber

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Received on Mon Mar 20 2023 - 12:30:02 PDT
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