Dear All/David,
I found the "getline.c" file that yiou attached and replaced the
"amber20_src/AmberTools/src/leap/src/leap/getline.c" as you suggested.
It fixed my problem! No further issues with the installation!
Thanks
Gert Kruger
On Fri, 2022-07-22 at 08:09 +0000, Gert Kruger via AMBER wrote:
> Dear All,
>
> I am installing Amber20/Ambertools21 on Ubuntu 22.04 LTS. I get the
> same error than Victor Nazarychev before -
> http://archive.ambermd.org/202110/0196.html
>
> While I am busy with the "make install" command.
>
> I see David proposed a fix to Victor. Any help you can suggest to me?
>
>
> Here follows my error:
>
> [ 94%] Building C object
> AmberTools/src/leap/src/leap/CMakeFiles/leap_common_obj.dir/getline.c
> .o
> /home/gert/amber20_src/AmberTools/src/leap/src/leap/getline.c:117:17:
> error: conflicting types for ‘write’; have ‘int()’
> 117 | extern int write();
> | ^~~~~
> In file included from /usr/include/x86_64-linux-
> gnu/bits/sigstksz.h:24,
> from /usr/include/signal.h:328,
> from
> /home/gert/amber20_src/AmberTools/src/leap/src/leap/getline.c:36:
> /usr/include/unistd.h:378:16: note: previous declaration of ‘write’
> with type ‘ssize_t(int, const void *, size_t)’ {aka ‘long int(int,
> const void *, long unsigned int)’}
> 378 | extern ssize_t write (int __fd, const void *__buf, size_t __n)
> __wur
> | ^~~~~
> /home/gert/amber20_src/AmberTools/src/leap/src/leap/getline.c:133:17:
> error: conflicting types for ‘read’; have ‘int()’
> 133 | extern int read();
>
> and further down (at the end):
>
> make[2]: ***
> [AmberTools/src/leap/src/leap/CMakeFiles/leap_common_obj.dir/build.ma
> ke
> :132:
> AmberTools/src/leap/src/leap/CMakeFiles/leap_common_obj.dir/getline.c
> .o
> ] Error 1
> make[1]: *** [CMakeFiles/Makefile2:7290:
> AmberTools/src/leap/src/leap/CMakeFiles/leap_common_obj.dir/all]
> Error
> 2
> make: *** [Makefile:156: all] Error 2
>
> Thanks alot and best wishes
> Gert
>
>
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Received on Thu Aug 04 2022 - 13:35:23 PDT
