Hi,
I am trying to install Amber20 (with AmberTools21), and have the following error
The compiler is gcc11.2, CUDA is cuda 11.6, and the system is Ubuntu 21.10
*****************
[ 86%] Building C object AmberTools/src/leap/src/leap/CMakeFiles/leap_common_obj.dir/getline.c.o
/scratch/users/guoquanc/amber20_debug/amber20_src/AmberTools/src/leap/src/leap/getline.c:117:17: error: conflicting types for ??write??; have ??int()??
117 | extern int write();
| ^~~~~
In file included from /usr/include/x86_64-linux-gnu/bits/sigstksz.h:24,
from /usr/include/signal.h:328,
from /scratch/users/guoquanc/amber20_debug/amber20_src/AmberTools/src/leap/src/leap/getline.c:36:
/usr/include/unistd.h:378:16: note: previous declaration of ??write?? with type ??ssize_t(int, const void *, size_t)?? {aka ??long int(int, const void *, long unsigned int)??}
378 | extern ssize_t write (int __fd, const void *__buf, size_t __n) __wur
| ^~~~~
/scratch/users/guoquanc/amber20_debug/amber20_src/AmberTools/src/leap/src/leap/getline.c:133:17: error: conflicting types for ??read??; have ??int()??
133 | extern int read();
| ^~~~
*****************
It is very to the previous question asked before, but I don't know how it was resolved, except the original poster change gcc to gcc9.
http://archive.ambermd.org/202110/0191.html
Thanks a lot,
guoquan
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Received on Fri Mar 25 2022 - 15:30:02 PDT
