[AMBER] T-REMD

From: Juliette Newell <juliette.newell.postgrad.manchester.ac.uk>
Date: Fri, 18 Mar 2022 09:57:03 +0000

Dear Amber Users,

I am currently trying to run a T-REMD simulation, with 24 replicas.

I have managed to fun the simulation with sander using the command:
mpirun -n $NSLOTS sander.MPI -O \ -ng 24 group.groupfile
However the run time is too long.

I would like to use pmemd.cuda. When running:
mpirun -n $NSLOTS pmemd.cuda.MPI -O \ -ng 24 group.groupfile

I get an error:
Pseudo-terminal will not be allocated because stdin is not a terminal.

Is anyone able to help with this?

Best wishes,
Juliette

_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Fri Mar 18 2022 - 03:00:02 PDT
Custom Search