[AMBER] Parameterize SO4

From: zz sheng <shengzizhang.gmail.com>
Date: Thu, 20 Jan 2022 00:37:41 -0500

Dear All,

My protein-protein interface has a SO4, I wonder how to parameterize it for MD? Could I use antechamber to generate the topology file and treat it as a 'ligand'? I saw ions have different ways of parameterization in the manual.

Thanks,

Best,

Zizhang Sheng
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Received on Wed Jan 19 2022 - 22:00:02 PST