Dear Amber developers:
Extra points, or "virtual sites" are a powerful way to improve the monopole distribution of a molecule.
I have noticed that we could add Extra Points in the following tutorial : http://ambermd.org/tutorials/advanced/tutorial35/index.php.
And, my questions are :
1. whether we also could compute MMPB(GB)SA after add Extra Points in Amber Topology File?
2. where could I download the amber version that could simulate Extra Points？
Looking forward to your reply!
shiyu
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Received on Wed Jan 19 2022 - 06:00:02 PST
