I have gcc version: gcc (Ubuntu 9.3.0-17ubuntu1~20.04) 9.3.0
I had also added "--disable-dependency-tracking" to the line starting with "./configure" in AmberTools/src/configure2 (about line 2684),
./configure --disable-dependency-tracking --host=x86_64-k1om-linux --build=x86_64-unknown-linux \
CC="$cc -mmic" CFLAGS="$cflags $cnooptflags" LDFLAGS="$ldflags -mmic" \
--prefix=$amberprefix --disable-shared --disable-netcdf-4 --disable-dap \
--disable-doxygen > ../netcdf_config.log 2>&1
But the same error persists.
On Friday, 19 March, 2021, 7:26:50 pm IST, David A Case <david.case.rutgers.edu> wrote:
On Fri, Mar 19, 2021, Rituparna Roy wrote:
>On installing Amber 18 in Ubuntu 20.04 LTS, I am getting the following
>error after ./configure gnu:
Can you say what version of gcc you are using (output of "gcc --version")?
For others on the list who may have encountered this, the error message is
this:
----------------------------------------------------------------------------
config.status: executing depfiles commands
config.status: error: in
`/home/ritu/software/amber18/AmberTools/src/netcdf-4.6.1':
config.status: error: Something went wrong bootstrapping makefile fragments
for automatic dependency tracking. Try re-running configure with the
'--disable-dependency-tracking' option to at least be able to build
the package (albeit without support for automatic dependency tracking).
See `config.log' for more details
----------------------------------------------------------------------------
Please post a comment if you know what is going on here.
Worth trying: add "--disable-dependency-tracking" to the line that
starts "./configure" in AmberTools/src/configure2 (about line 2684). Then
re-run the configure script.
...good luck...dac
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Received on Fri Mar 19 2021 - 08:00:05 PDT
