[AMBER] Cpptraj

From: Stejskal, Lenka <lenka.stejskal.15.ucl.ac.uk>
Date: Thu, 21 Jan 2021 15:14:43 +0000

Hi, I am having issue with topology file reading in cpptraj. I had the CMAP issue reported previously: http://archive.ambermd.org/202012/0257.html<https://eur01.safelinks.protection.outlook.com/?url=http%3A%2F%2Farchive.ambermd.org%2F202012%2F0257.html&data=04%7C01%7C%7Cf383af2e807f4e9ec14d08d8bdefead3%7C1faf88fea9984c5b93c9210a11d9a5c2%7C0%7C0%7C637468185431308783%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C1000&sdata=siDuZb85C29nPtgI4PMECN7Qsghb701fpSVtwzqAXSc%3D&reserved=0>

I have used the latest version of cpptraj and it crashes:

parm step5_input.parm7
parm step5_input.parm7
Reading 'step5_input.parm7' as Amber Topology
CHAMBER topology:
CHARMM36 All-atom Force Field
terminate called after throwing an instance of 'BadConversion'
what():convertToInteger("IO.")
Abort (core dumped)


Thank you,

Lenka
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Received on Thu Jan 21 2021 - 07:30:02 PST
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