Hi Dr. David,
Thank you for your response.
I had another query, could you please give me idea how i can compress a
model in AMBER so that it will deform?
Thank you in advance.
Any help would be appreciated.
Sincerely,
Sharmi
On Sat, Jan 16, 2021, 8:44 AM David A Case <david.case.rutgers.edu> wrote:
> On Fri, Jan 15, 2021, Pinky Mazumder wrote:
> >
> >I have built a carbohydrate molecule in AMBER using the force field
> >GLYCAM_06j-1. Then, using (.top) and (.inpcrd), amber2lammps.py I made the
> >data file.
> >
> >Now I want to perform the simulation in Lammps. Which pair style should I
> >choose to run the simulation in Lammps?
>
> ambe2lammps.py is not a part of AmberTools. I hope someone on this list
> can
> answer your question, but you may need to ask in forums that have Lammps
> users.
>
> ...dac
>
>
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Received on Sat Jan 16 2021 - 14:00:02 PST
