Re: [AMBER] Query about generated (.pdb) files from GLYCAM Carbo builder

From: Gustaf Olsson <gustaf.olsson.lnu.se>
Date: Wed, 11 Nov 2020 07:51:49 +0000

Comparing the files, what difference can you see?

diff -y --suppress-common 1.pdb 1_AMBER.pdb

> On 10 Nov 2020, at 20:51, Pinky Mazumder <pmazumder67.gmail.com> wrote:
>
> Hi all,
>
> I have built hemicellulose using the GLYCAM Carbohydrate builder. So, when
> I downloaded the glycamstructure.tar.gz, I saw there were three (.pdb)
> files *(1.pdb, 1_AMBER.pdb, and 1.AMBER_noh.pdb). *
>
> Could you please let me know the difference between these three (.pdb)
> files especially between *(1.pdb and 1_AMBER.pdb)* files?
>
> Thanks in advance!
>
>
> Regards.
> Pinky
>
> --
> Pinky, Sharmi
> AL,US
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Received on Wed Nov 11 2020 - 00:00:02 PST
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