Dear Mariano,
Yes, I am using VMD under windows. I do not know Windows Subsystem
for Linux. I will see whether I can find the details.
Thank you for your email.
Best,
Wu
________________________________
From: Mariano Curti <mcurti.iciq.es>
Sent: Friday, October 16, 2020 1:01 AM
To: amber.ambermd.org <amber.ambermd.org>
Subject: Re: [AMBER] VMD 1.9.4 could not read AMBER16 .mdcrd
Dear Wu,
Adding to this response, let me please mention that if you must use VMD
under Windows, a way out is to install it through WSL (Windows Subsystem
for Linux).
Best regards,
Mariano
--
Dr. Mariano Curti
Postdoctoral researcher - Romero Group
Institute of Chemical Research of Catalonia (ICIQ)
Av. Països Catalans 16 – 43007 Tarragona (Spain)
mcurti.iciq.es
On 16/10/2020 7:31, Elvis Martis wrote:
> Hi
> If you are using VMD on windows, then it cannot load NetCDF trajectories at
> the moment is what I have observed.
> Best Regards
> Elvis
>
>
>
> On Fri, 16 Oct 2020 at 09:55, Wu Xu <wu.xu.louisiana.edu> wrote:
>
>> Dear Amber users
>>
>> I used AMBER16 sander.MPI (-x filename.mdcrd) to create .mdcrd. However,
>> VMD 1.9.4 could not read it. So no frames were added into .prmtop loaded
>> first.
>>
>> I do not see the option "netCDF" format from VMD.
>>
>> Do you know how to solve this problem? Thanks,
>>
>> Wu
>>
>>
>> Dr. Wu Xu
>>
>> Professor of Biochemistry
>>
>> Department of Chemistry
>>
>> Room No. 138, Montgomery Hall
>>
>> 300 E. St. Mary BLVD
>>
>> P.O. Box 43700
>>
>> University of Louisiana at Lafayette
>>
>> Lafayette, LA 70504
>>
>> Telephone: 337-482-5684 (office)
>>
>> 337-482-6739 (lab)
>>
>> Fax: 337-482-5676
>>
>> Email: wxx6941.louisiana.edu<mailto:wxx6941.louisiana.edu>
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
>>
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Received on Fri Oct 16 2020 - 06:00:04 PDT