Hi Filip,
Yes I just got done with benchmarking the 3080. Updated table below. - 3080 looks to be the best value for money (if you don't need the extra memory on the 3090).
All the best
Ross
Amber 20 Benchmarks
CUDA 11.1
Amber 20 Update 6
AmberTools 20 Update 9
Driver 455.23.04
Throughput ns/day GPU Model
Benchmark RTX2080TI RTX6000 A100 PCIe RTX3080 RTX3090
JAC Production NVE 4fs 970.51 1034.88 1199.22 1101.24 1196.5
JAC Production NPT 4fs 940.61 1004.03 1194.5 1086.21 1157.76
JAC Production NVE 2fs 510.21 540.17 611.08 585.81 632.19
JAC Production NPT 2fs 488.36 515.86 610.09 557.6 595.28
FactorIX Production NVE 2fs 205.92 217.25 271.36 234.58 264.78
FactorIX Production NPT 2fs 189.99 206 252.87 217.5 248.65
Cellulose Production NVE 2fs 43.89 47.41 85.23 53.44 63.23
Cellulose Production NPT 2fs 40.77 45.24 77.98 49.69 58.3
STMV Production NPT 4fs 25.21 28.49 52.02 32.18 38.65
TRPCage GB 2fs 1151.74 1189.25 1040.61 1332.27 1225.53
Myoglobin GB 2fs 505.93 600.83 661.22 619.67 621.73
Nucleosome GB 2fs 15.22 16.81 29.66 17.72 21.08
> On Oct 6, 2020, at 04:44, Filip Fratev <fratev.biomed.bas.bg> wrote:
>
> Hi Ross,
>
> Thank you very much for this helpful update!
>
> Did you already mange to obtain some data for RTX3080? This would be very interesting bench considering the 2x lower price, 3080 vs 3090, and expected not so significant difference with 3090.
>
> Can you also help me with an advice how to compile with CUDA 11.1? I can do that only by Cuda 11.0.
>
> Thank you!
>
> Regards,
>
> Filip
>
>
> На 28-Sep-20 в 02:30, Ross Walker написа:
>> Hi Amberites,
>>
>> For those who are interested here's benchmarks for Amber 20 on the latest GPUs. I'll add this to the website shortly.
>>
>> CUDA 11.1
>> Amber 20 Update 6
>> AmberTools 20 Update 9
>> Driver 455.23.04
>>
>> Throughput ns/day GPU Model
>> Benchmark RTX2080TI RTX6000 A100 PCIe RTX3090
>> JAC Production NVE 4fs 970.51 1034.88 1199.22 1196.5
>> JAC Production NPT 4fs 940.61 1004.03 1194.5 1157.76
>> JAC Production NVE 2fs 510.21 540.17 611.08 632.19
>> JAC Production NPT 2fs 488.36 515.86 610.09 595.28
>> FactorIX Production NVE 2fs 205.92 217.25 271.36 264.78
>> FactorIX Production NPT 2fs 189.99 206.00 252.87 248.65
>> Cellulose Production NVE 2fs 43.89 47.41 85.23 63.23
>> Cellulose Production NPT 2fs 40.77 45.24 77.98 58.31
>> STMV Production NPT 4fs 25.21 28.49 52.02 38.65
>> TRPCage GB 2fs 1151.74 1189.25 1040.61 1225.53
>> Myoglobin GB 2fs 505.93 600.83 661.22 621.73
>> Nucleosome GB 2fs 15.22 16.81 29.66 21.08
>>
>> RTX3080 coming in a few days.
>>
>> All the best
>> Ross
>>
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
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Received on Tue Oct 06 2020 - 10:30:03 PDT
