Try re-running configure with the '--disable-dependency-tracking' option
Which OS are you trying to compile on?
What is your configuration? Are you using cc/fortran compilers and the amber miniconda setup?
// Gustaf
> On 22 Sep 2020, at 08:59, Nisha Amarnath Jonniya <phd1601271002.iiti.ac.in> wrote:
>
> *This is the content of the log file:*
>
> config.status: error: in
> `/home/nisha/software/amber/amber18/AmberTools/src/netcdf-4.6.1':
> config.status: error: Something went wrong bootstrapping makefile fragments
> for automatic dependency tracking. Try re-running configure with the
> '--disable-dependency-tracking' option to at least be able to build
> the package (albeit without support for automatic dependency tracking).
>
>
> On Tue, Sep 22, 2020 at 12:26 PM Gustaf Olsson <gustaf.olsson.lnu.se> wrote:
>
>> What does the content of the log file say?
>>
>> /home/nisha/software/amber/amber18/AmberTools/src/netcdf_config.log
>>
>> // Gustaf
>>
>>> On 22 Sep 2020, at 07:22, Nisha Amarnath Jonniya <
>> phd1601271002.iiti.ac.in> wrote:
>>>
>>> Dear Amber Users,
>>>
>>> I am trying to install amber18 and encountered the following error.
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>> *-- Checking NetCDF... Using bundled NetCDF library. Starting NetCDF
>> build.
>>> Configuring NetCDF C interface (may be time-consuming)...Error: NetCDF C
>>> configure returned 1 NetCDF configure failed! Check the
>>> netcdf_config.log file in the
>>> /home/nisha/software/amber/amber18/AmberTools/src directory.Configure
>>> failed due to the errors above!*
>>>
>>> Any suggestions and help would be appreciated.
>>>
>>> Thanks and regards
>>>
>>>
>>> Nisha Amarnath Jonniya
>>> PhD Research Scholar
>>> Biosciences and Biomedical Engineering
>>> Indian Institute of Technology, Indore
>>> India
>>> _______________________________________________
>>> AMBER mailing list
>>> AMBER.ambermd.org
>>> http://lists.ambermd.org/mailman/listinfo/amber
>>
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
>>
>
>
> --
>
> Nisha Amarnath Jonniya
> PhD Research Scholar
> Biosciences and Biomedical Engineering
> Indian Institute of Technology, Indore
> India
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
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Received on Tue Sep 22 2020 - 00:30:02 PDT
