Re: [AMBER] Cpptraj pucker amplitude units?

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Fri, 4 Sep 2020 13:26:23 -0400

Hi,

Prior to version 4.16.0 amplitudes were in radians. Since then degrees. See
https://github.com/Amber-MD/cpptraj/pull/740

On Thu, Sep 3, 2020 at 2:10 PM Kenneth Huang <kennethneltharion.gmail.com>
wrote:

> Hi all,
>
>
>
> A quick question- for the pucker command in cpptraj, am I correct in
>
> understanding the amplitude for Cremer and Pople's method is in units of
>
> angstroms for nucleic acids?
>
>
>
> Likewise, when using Altona and Sundaralingam's method, it would be in
>
> radians?
>
>
>
> Best,
>
>
>
> Keneth
>
>
>
> --
>
> Ask yourselves, all of you, what power would hell have if those imprisoned
>
> here could not dream of heaven?
>
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Received on Fri Sep 04 2020 - 10:30:03 PDT
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