Re: [AMBER] Amber nc trajectory file analysis by x3dna

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Fri, 31 Jul 2020 11:28:19 -0400

Hi,

The 'nastruct' analysis in CPPTRAJ uses the same algorithms and
reference structures that 3DNA does, so you could just use that. See
the manual for full details.

-Dan

On Fri, Jul 31, 2020 at 11:06 AM Jenny 148 <jenny.rs140.gmail.com> wrote:
>
> Dear all,
>
> I have a 500ns trajectory file of a dna duplex, which I would like to
> analyze using x3dna package. Since I do not know much about this, could
> someone let me know about the procedure for the analysis of the same??
> Could we directly analyze the nc file in x3dna ?
>
> Thank you
> Jenny
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Received on Fri Jul 31 2020 - 08:30:04 PDT
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