[AMBER] Error pmemd.cuda amber 20 GPU

From: Camila Clemente <camilamaraclemente.gmail.com>
Date: Thu, 9 Jul 2020 11:11:29 -0300

Hi
I can't install pmemd.cuda (amber20) on Centos7.
The following modules were loaded:
-gcc/5
-cuda/8.0
-cmake/3.16.2
-export HOME_CUDA=/opt/cuda/8.0
-export LD_LIBRARY_PATH="/opt/cuda/8.0/lib:${LD_LIBRARY_PATH
- add to run_cmake -DCUDA_TOOLKIT_ROOT_DIR=/opt/cuda/8.0

I did the following:

cd $AMBERHOME
make clean
./configure -cuda gnu
make install

and the error was:

Makefile:226: atenciĆ³n: se imponen comandos para el objetivo
`ArraySimulator.o'
Makefile:218: atenciĆ³n: se ignoran las instrucciones viejas para el
objetivo `ArraySimulator.o'
[MDGX] NVCC ArraySimulator.cu
kDynamics.h(311): error: too many arguments in function call

kDynamics.h(341): error: too many arguments in function call

kDynamics.h(1565): error: too many arguments in function call

kDynamics.h(1599): error: too many arguments in function call

kDynamics.h(311): error: too many arguments in function call

kDynamics.h(341): error: too many arguments in function call

kDynamics.h(1565): error: too many arguments in function call

kDynamics.h(1599): error: too many arguments in function call

kDynamics.h(311): error: too many arguments in function call

kDynamics.h(341): error: too many arguments in function call

kDynamics.h(1565): error: too many arguments in function call

kDynamics.h(1599): error: too many arguments in function call

kDynamics.h(311): error: too many arguments in function call

kDynamics.h(341): error: too many arguments in function call

kDynamics.h(1565): error: too many arguments in function call

kDynamics.h(1599): error: too many arguments in function call

kDynamics.h(311): error: too many arguments in function call

kDynamics.h(341): error: too many arguments in function call

kDynamics.h(1565): error: too many arguments in function call

kDynamics.h(1599): error: too many arguments in function call

kDynamics.h(311): error: too many arguments in function call

kDynamics.h(341): error: too many arguments in function call

kDynamics.h(1565): error: too many arguments in function call

kDynamics.h(1599): error: too many arguments in function call

kDynamics.h(311): error: too many arguments in function call

kDynamics.h(341): error: too many arguments in function call

kDynamics.h(1565): error: too many arguments in function call

kDynamics.h(1599): error: too many arguments in function call

kDynamics.h(311): error: too many arguments in function call

kDynamics.h(341): error: too many arguments in function call

kDynamics.h(1565): error: too many arguments in function call

kDynamics.h(1599): error: too many arguments in function call

kDynamics.h(311): error: too many arguments in function call

kDynamics.h(341): error: too many arguments in function call

kDynamics.h(1565): error: too many arguments in function call

kDynamics.h(1599): error: too many arguments in function call

kDynamics.h(311): error: too many arguments in function call

kDynamics.h(341): error: too many arguments in function call

kDynamics.h(1565): error: too many arguments in function call

kDynamics.h(1599): error: too many arguments in function call

kDynamics.h(311): error: too many arguments in function call

kDynamics.h(341): error: too many arguments in function call

kDynamics.h(1565): error: too many arguments in function call

kDynamics.h(1599): error: too many arguments in function call

kDynamics.h(311): error: too many arguments in function call

kDynamics.h(341): error: too many arguments in function call

kDynamics.h(1565): error: too many arguments in function call

kDynamics.h(1599): error: too many arguments in function call

48 errors detected in the compilation of
"/tmp/tmpxft_00005702_00000000-21_ArraySimulator.compute_61.cpp1.ii".
make[2]: *** [ArraySimulator.o] Error 2
make[2]: se sale del directorio
`/home/cclemente/amber20_src/AmberTools/src/mdgx'
make[1]: *** [cuda_serial] Error 2
make[1]: se sale del directorio `/home/cclemente/amber20_src/AmberTools/src'
make: *** [install] Error 2

Any help is appreciated
Thanks

-- 
*Camila*
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Received on Thu Jul 09 2020 - 07:30:05 PDT
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