Dear AMBER community,
I am interested in adding a single molecule of galactose to 5-Hydroxylysine.
Unfortunately, I am not able to find a template for this modified residue.
Moreover, the AMBER18 reference manual tells me in the section "Setting up
protein pdb files for glycosylation in LEaP":
"At present, it is possible to link glycans to serine, threonine,
hydroxyproline and asparagine".
Can someone please recommend me a procedure for creating a
5-Galacto-hydroxylysine? Even better, can anyone point me to templates to be
used with Leap?
Any hint is highly appreciated!
Stay healthy,
Harald
--
--------------------------------------------------------
PD Dr. Harald Lanig Universitaet Erlangen/Nuernberg
Zentralinstitut fuer Scientific Computing (ZISC)
Forschungsdatenmanagement SFB 814 und SFB 1411
Martensstrasse 5a 91058 Erlangen
+49 9131-85 20781 [1]harald.lanig.fau.de
--------------------------------------------------------
References
1. mailto:harald.lanig.fau.de
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sun May 17 2020 - 07:30:02 PDT
