This probably goes without saying, but there are frcmods for a number of
molecules (e.g. lipids, GFP-type chromophores, urea) represented in the
amber tree itself (e.g. amber/dat/leap/parm).
On Wed, May 6, 2020 at 1:43 AM Gustaf Olsson <gustaf.olsson.lnu.se> wrote:
> I don't really think that this is what you are looking for though I have
> found it useful for some structures in the past:
>
> http://research.bmh.manchester.ac.uk/bryce/amber
>
>
> I have never personally used it though it seems to pop up in conversation
> from time to time
>
> https://upjv.q4md-forcefieldtools.org/RED/
>
>
> Best regards
>
> // Gustaf
>
> ________________________________
> Från: Jenny 148 <jenny.rs140.gmail.com>
> Skickat: den 6 maj 2020 07:33:20
> Till: AMBER Mailing List
> Ämne: [AMBER] FRCMOD FILE DATABASE
>
> Dear all,
> Do we have any database which has the prepi and frcmod files of reported
> structures? I am in need of verifying a few structure parameters and need
> some reference. I have a series of aromatic rings- like quinolinium ring ,
> indole ring and so on. Please syggest if there is some webserver which has
> ligand parameters.
>
> Thank you.
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--
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Brent P. Krueger (he/him/his)......phone: 616 395 7629
Professor......................................fax: 616 395 7118
Hope College...............................Schaap Hall 2120
Department of Chemistry
Holland, MI 49423
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Received on Wed May 06 2020 - 05:30:03 PDT
