Dear all,
I want to compute the distance between two type of atoms from a MD
trajectory.
I am using cpptraj which returns the distance between the center of mass:
distance dist .%Type1 .%Type2 out file.dat
However, the file.dat contains different distances from those that
I can check in molecular editor (like VMD).
Do you have any idea about how to get just the distances between each
individual atom types?
Thanks in advance for the help.
Cheers,
Manuel
--
*Emanuele Falbo*
PhD student
Penfold group
School of Natural and Environmental Sciences
Bedson Building, Newcastle University
Newcastle upon Tyne, NE1 7RU
w: http://tompenfoldresearch.weebly.com/
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Received on Mon May 04 2020 - 05:00:02 PDT
