Dear Sruthi,
I would like to suggest 3D-NuS (
http://iith.ac.in/3dnus/RNA-DNA%20Hybrid.html),
https://doi.org/10.1016/j.jmb.2017.06.013, for building DNA-RNA hybrid
structures. The structural parameters used for modeling hybrid structures
are derived from DNA-RNA hybrid structures deposited in the PDB.
On Sat, 25 Apr, 2020, 8:07 PM Sruthi Sudhakar, <sruthisudhakarraji.gmail.com>
wrote:
> Respected group members,
>
> I am familiar with creating the DNA duplex structure in AMBER. I would like
> to know if there is a script that can be followed to build a DNA-RNA hybrid
> in AMBER.
> Please help.
>
> Sruthi .
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Received on Mon Apr 27 2020 - 21:00:02 PDT
