I would suggest looking into the papers of Michael Crowley or Gregg
Beckham.
On Tue, Apr 14, 2020, 11:40 PM Pinky Mazumder <pmazumder67.gmail.com> wrote:
> Thank you Sir.
>
> On Sat, Apr 11, 2020 at 3:24 AM Karl Kirschner <k.n.kirschner.gmail.com>
> wrote:
>
> > Hello Pinky,
> >
> > I'm not sure if you will receive the feedback that you are looking for
> > from your emails. We have given you some guidance in previous answers
> about
> > how to learn about using Amber (i.e. Leap, carbohydrates model building)
> so
> > that you can problem solve your issues. There is not an generic/easy
> answer
> > to your general requests. For the bio systems that you are interested in
> > (i.e. lignins will likely require creating new Amber residues), you have
> to
> > become VERY familiar with how Amber works by doing tutorials and by
> reading
> > the manual. As a beginner, this can be very challenging, especially if
> you
> > don't have someone local who can mentor you through the process. I would
> > strongly recommend finding a mentor at your institute that is an expert
> in
> > molecular dynamics modeling to help guide you.
> >
> > Best regards,
> > Karl
> >
> > On Sat, Apr 11, 2020 at 9:21 AM Pinky Mazumder <pmazumder67.gmail.com>
> > wrote:
> >
> > > Dear AMBER Users,
> > >
> > > Could you please tell me how to build the chain of lignin?
> > >
> > >
> > > Thank you.
> > >
> > >
> > > Regards,
> > > Pinky
> > > --
> > > Pinky
> > > AL,US
> > > _______________________________________________
> > > AMBER mailing list
> > > AMBER.ambermd.org
> > > http://lists.ambermd.org/mailman/listinfo/amber
> > >
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
>
> --
> Pinky
> AL,US
> _______________________________________________
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>
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Received on Wed Apr 15 2020 - 04:00:02 PDT
