Dear all!
I just installed ambertools 16 and AMBERTOOLs in CentOS 7 system, and the installation process seemed successful. However, when I run "make test" command, I get the following error:
"
Error: Could not import Amber Python modules!
Probably your Amber Python environment was not set up correctly.
We recommend adding the line:
test -f /home/tangyuanhui/softwares/amber/amber16/amber.sh && source /home/tangyuanhui/softwares/amber/amber16/amber.sh (sh/bash/zsh)
or
test -f /home/tangyuanhui/softwares/amber/amber16/amber.csh && source /home/tangyuanhui/softwares/amber/amber16/amber.csh (csh/tcsh)
to your login shell resource file (e.g., ~/.bashrc or ~/.cshrc).
I have read previous error solutions. I have added the line in the ~/.bashrc as below:
"
[tangyuanhui.mem436 amber16]$ cat ~/.bashrc
# .bashrc
# Source global definitions
if [ -f /etc/bashrc ]; then
. /etc/bashrc
fi
source /home/tangyuanhui/softwares/amber/amber16/amber.sh
test -f /home/tangyuanhui/softwares/amber/amber16/amber.sh && source /home/tangyuanhui/softwares/amber/amber16/amber.sh
"
I have also source the ~/.bashrc file.
According to David, I have run the two orders :"
cd $AMBERHOME/bin
ls -l amber.python"
The results show that: "lrwxrwxrwx. 1 root root 23 3月 17 12:23 amber.python -> ../miniconda/bin/python"
"
Now I have tried all the solutions mentioned previously, but still stuck on the error.
Is there anybody having met the problem before, would you please help me with this?
Best wishes!
--
Yuanhui Tang
Doctor Candidate
Beijing Key Laboratory for Membrane Materials and Engineering
Department of Chemical Engineering, Tsinghua University
Beijing 100084, PR China
Tel: 86-10-62794742;
Email: tangyh08.gmail.com
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Received on Wed Mar 18 2020 - 00:00:02 PDT
