Re: [AMBER] how to turned off C N terminal amino in tleap

From: Petro <subscribe.khoroshyy.net>
Date: Sun, 15 Mar 2020 10:51:19 +0100

Hi YT.
Could you clarify what you want to achieve by this?
Best.
Petro.

On Sun, Mar 15, 2020 at 8:21 AM Yeng-Tseng Wang <c00jsw00.gmail.com> wrote:

> Dear all,
> when I loaded a pdb file, the log file is shown in below. I want to turn
> off C N terminal amino in tleap. How can I do ?
> Thanks
> YT
>
>
> log:
> Loading PDB file: ./CP1.pdb
> Added missing heavy atom: .R<NPHE 1>.A<CB 7>
> .............................................
> Added missing heavy atom: .R<GLU 5>.A<OE2 13>
> Added missing heavy atom: .R<CGLY 6>.A<OXT 8>
> total atoms in file: 24
> Leap added 75 missing atoms according to residue templates:
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Received on Sun Mar 15 2020 - 03:00:01 PDT
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