Re: [AMBER] information regarding space filling visualization

From: Ahmed Elrashedy <ahmedelrashedy45.gmail.com>
Date: Sat, 14 Mar 2020 15:04:43 +0200

You might also use chemira program

Thank you and Best regards.

Ahmed Elrashedy

Molecular Bio-computation and Drug Design Laboratory

Discipline of Pharmaceutical Sciences

School of Health Science

University of KwaZulu-Natal

Westville Campus

Private Bag X54001

Durban 4000

South Africa


On Sat, Mar 14, 2020 at 11:50 AM Carlos Simmerling <
carlos.simmerling.gmail.com> wrote:

> You might look at the VMD site, they have many sample pictures and
> tutorials. Amber doesn't do visualization of that type. Also look at pymol.
>
> On Sat, Mar 14, 2020, 5:16 AM Prasanth G, Research Scholar <
> prasanthghanta.sssihl.edu.in> wrote:
>
> > Dear all,
> >
> > Could you please suggest on which program to use to produce this kind of
> > space filling models for protein with ligand.
> >
> > image.png
> > <
> >
> https://drive.google.com/a/sssihl.edu.in/file/d/1jZ-I_DI-o3r2l5q5B4haBnAafuvZI_XF/view?usp=drive_web
> > >
> >
> > It would be helpful if you can share a link to a tutorial on how to how
> to
> > go about doing this.
> > Thank you.
> >
> > --
> > Regards,
> > Prasanth.
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sat Mar 14 2020 - 06:30:03 PDT
Custom Search