[AMBER] AMBER 18 compilation error with CUDA 10.2

From: Abhilash J <md.scfbio.gmail.com>
Date: Sun, 1 Mar 2020 20:08:23 -0500

Hi everyone,

   I am trying to compile AMBER 18 for RTX2080 Super using CUDA 10.2 (as
Ross suggested, it will get better performance). But i am getting the
following error: */bin/ld: cannot find -lcublas *(more lines attached
below) while compiling the GPU code. The compilation of the same code with
CUDA 9.2 runs fine without this error. Serial compile runs fine.
   Can someone help this.
============error file======================
Warning: Deleted feature: ASSIGN statement at (1)
/bin/ld: cannot find -lcublas
collect2: error: ld returned 1 exit status
make[2]: *** [pbsa.cuda] Error 1
make[1]: *** [cuda_serial] Error 2
make: *** [install] Error 2

========out file====================
/usr/local/cuda-10.2/bin/nvcc -gencode arch=compute_30,code=sm_30 -gencode
arch=compute_35,code=sm_35 -gencode arch=compute_37,code=sm_37 -gencode
arch=compute_50,code=sm_50 -gencode arch=compute_52,code=sm_52 -gencode
arch=compute_53,code=sm_53 -gencode arch=compute_60,code=sm_60 -gencode
arch=compute_61,code=sm_61 -gencode arch=compute_60,code=sm_70, -gencode
arch=compute_61,code=sm_70 -Wno-deprecated-declarations -use_fast_math -O3
 -ccbin g++ -I../cusplibrary-cuda9 -o cusp_LinearSolvers.o -c
cusp_LinearSolvers.cu -DDIA
[PBSA] FC pbsa.cuda
make[2]: Leaving directory
make[1]: Leaving directory `/home33/ajayaraj/AMBER/amber18/AmberTools/src'
AMBER mailing list
Received on Sun Mar 01 2020 - 17:30:02 PST
Custom Search