Re: [AMBER] Calculation of mask for TI input

From: Carlos Simmerling <carlos.simmerling.gmail.com>
Date: Tue, 28 Jan 2020 05:40:09 -0500

Can you show us your input file and copy the error message from the output?

On Mon, Jan 27, 2020, 11:23 PM Airy Sanjeev <airy.sanjeev01.gmail.com>
wrote:

> Hello Amber Users,
>
> I am trying to calculate TI for side-chain mutation (from WT amyloid beta
> peptide to the other mutants) but unfortunately I am facing problem in the
> inputs. Can you please let me know how to calculate the mask in the input
> file (starting from minimization). It would be great help if you give me
> some valuable suggestion and idea with my research work.
>
> Thank you in advance
> --
> with best regards,
> Airy Sanjeev, PhD
> Post Doctoral Fellow
> Indian Institute of Technology Guwahati, Guwahati
> Assam-781039, India
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Received on Tue Jan 28 2020 - 03:00:01 PST
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