Re: [AMBER] Reg. working of Periodic Boundary Conditions

From: David Case <david.case.rutgers.edu>
Date: Tue, 21 Jan 2020 17:38:10 +0000

On Tue, Jan 21, 2020, DHEERAJ CHITARA wrote:
>
>How periodic boundary conditions works with different box types in amber18.

I think you will need to ask a more specific question. There is really
only one "type" of box in Amber: a triclinic unit cell repeated via
translations. There are a few places where a separate calculation is
done for rectangular or "truncated ocataheral" boxes, but those are just
done for (rather minor) gains in efficiency.

...dac


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Received on Tue Jan 21 2020 - 10:00:02 PST
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