Re: [AMBER] error in namelist

From: David A Case <david.case.rutgers.edu>
Date: Tue, 5 Nov 2019 12:47:52 -0500

On Tue, Nov 05, 2019, Debarati DasGupta wrote:
>
>| Executable path: sander

>
> icfe = 1, ifsc = 1, clambda = 0.5, scalpha = 0.5, scbeta = 12.0,

In sander, softcore and TI are only available in parallel. So, you will
need to be running sander.MPI to access variables like scalpha, etc.

> timask1 = ':C3N', timask2 = '',
> scmask1 = ':C3N', scmask2 = ''

Also: items like the above are pmemd-specific. Basically, TI is one
place where pmemd and sander are very different. There is a fairly
extensive discussion of this in the Reference Manual.

....dac


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Received on Tue Nov 05 2019 - 10:00:02 PST
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