[AMBER] Problem in the x-axis of SASA analysis

From: Airy Sanjeev <airy.sanjeev01.gmail.com>
Date: Tue, 29 Oct 2019 11:17:03 +0530

Hello Amber Users,

I tried to calculate SASA for the last 90 ns trajectory but in the plot
(xmgrace) it generated the number of frames (x-axis). My input file is as

*trajin prod1.mdcrd 5440 50000center :1-168 mass originimage origin
centerstrip :WATstrip :Na+strip :Cl-secstruct :1-168 out dssp_x.gnu
dssp_x.agrsurf res1sasa :1-168 out surf_x.dat*

Kindly help me to sort out the problem, I basically need total time in the
x-axis and not the number of frames.

with best regards,
Airy Sanjeev, PhD
Post Doctoral Fellow
Indian Institute of Technology Guwahati, Guwahati
Assam-781039, India
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Received on Mon Oct 28 2019 - 23:00:02 PDT
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