On Mon, Oct 7, 2019 at 5:57 PM David A Case <david.case.rutgers.edu> wrote:
> On Mon, Oct 07, 2019, Sunita Patel wrote:
> >
> >I did ...
> >./configure -mpi --skip-python gnu
> >make install
> >
> >Error: Missing actual argument for argument 'ismremd' at (1)
> >make[3]: *** [binrestart.o] Error 1
>
> (a) Can you provide more of the error message (the material right before
> the snippet you provided above?
>
Warning: Unused dummy argument 'nfftdim2' at (1)
short_ene.F90: In function ‘short_ene_dip’:
short_ene.F90:1590: warning: ‘lambda3’ may be used uninitialized in this
function
short_ene.F90:1590: warning: ‘lambda5’ may be used uninitialized in this
function
short_ene.F90:1590: warning: ‘lambda7’ may be used uninitialized in this
function
short_ene.F90: In function ‘short_ene’:
short_ene.F90:302: warning: ‘df’ may be used uninitialized in this function
debug.F90: In function ‘do_percentiles’:
debug.F90:1631: warning: ‘apmed’ may be used uninitialized in this function
debug.F90:1631: warning: ‘apsev5’ may be used uninitialized in this function
debug.F90:1631: warning: ‘apninety’ may be used uninitialized in this
function
debug.F90:1632: warning: ‘apninety5’ may be used uninitialized in this
function
debug.F90:1632: warning: ‘apninety9’ may be used uninitialized in this
function
extra_pts.F90: In function ‘do_14_dipole’:
extra_pts.F90:1705: warning: ‘lambda3’ may be used uninitialized in this
function
extra_pts.F90:1705: warning: ‘lambda5’ may be used uninitialized in this
function
extra_pts.F90:1705: warning: ‘lambda7’ may be used uninitialized in this
function
ar: creating sebomd.a
ar: creating sys.a
....................
.....................
Warning: Unused dummy argument 'cn3' at (1)
short_ene.F90:1543.66:
eedmeth, mpoltype, dxdr, eedvir, cn3, cn4, cn5)
1
Warning: Unused dummy argument 'cn4' at (1)
short_ene.F90:1543.71:
eedmeth, mpoltype, dxdr, eedvir, cn3, cn4, cn5)
1
Warning: Unused dummy argument 'cn5' at (1)
short_ene.F90: In function ‘short_ene_dip’:
short_ene.F90:1590: warning: ‘lambda3’ may be used uninitialized in this
function
short_ene.F90:1590: warning: ‘lambda5’ may be used uninitialized in this
function
short_ene.F90:1590: warning: ‘lambda7’ may be used uninitialized in this
function
short_ene.F90: In function ‘short_ene’:
short_ene.F90:302: warning: ‘df’ may be used uninitialized in this function
extra_pts.F90: In function ‘do_14_dipole’:
extra_pts.F90:1705: warning: ‘lambda3’ may be used uninitialized in this
function
extra_pts.F90:1705: warning: ‘lambda5’ may be used uninitialized in this
function
extra_pts.F90:1705: warning: ‘lambda7’ may be used uninitialized in this
function
Action_XtalSymm.cpp: In member function ‘bool
Action_XtalSymm::OriginsAlign(Action_XtalSymm::XtalDock*, const
std::vector<int, std::allocator<int> >&, int) const’:
Action_XtalSymm.cpp:607: warning: ‘origx’ may be used uninitialized in this
function
Action_XtalSymm.cpp:607: warning: ‘origy’ may be used uninitialized in this
function
Action_XtalSymm.cpp:607: warning: ‘origz’ may be used uninitialized in this
function
Parm_Amber.cpp: In member function ‘int Parm_Amber::ReadPointers(int,
Topology&, const Parm_Amber::FortranData&)’:
Parm_Amber.cpp:576: warning: comparison between signed and unsigned integer
expressions
bind.c: In function ‘rl_translate_keyseq’:
bind.c:445: warning: suggest parentheses around assignment used as truth
value
bind.c: In function ‘rl_parse_and_bind’:
bind.c:1188: warning: suggest parentheses around assignment used as truth
value
bind.c:1279: warning: suggest parentheses around assignment used as truth
value
bind.c: In function ‘rl_function_dumper’:
bind.c:2051: warning: suggest parentheses around assignment used as truth
value
bind.c: In function ‘rl_generic_bind’:
bind.c:342: warning: ‘k.type’ may be used uninitialized in this function
complete.c: In function ‘fnwidth’:
complete.c:604: warning: implicit declaration of function ‘wcwidth’
complete.c: In function ‘_rl_find_completion_word’:
complete.c:886: warning: suggest parentheses around assignment used as
truth value
complete.c: In function ‘rl_completion_matches’:
complete.c:1805: warning: suggest parentheses around assignment used as
truth value
complete.c: In function ‘rl_username_completion_function’:
complete.c:1856: warning: suggest parentheses around assignment used as
truth value
display.c: In function ‘rl_redisplay’:
display.c:714: warning: implicit declaration of function ‘wcwidth’
display.c:462: warning: ‘n0’ may be used uninitialized in this function
display.c:467: warning: ‘wc_width’ may be used uninitialized in this
function
histexpand.c: In function ‘get_history_event’:
histexpand.c:206: warning: suggest parentheses around assignment used as
truth value
input.c: In function ‘rl_read_key’:
input.c:423: warning: suggest parentheses around assignment used as truth
value
mbutil.c: In function ‘_rl_find_next_mbchar_internal’:
mbutil.c:118: warning: implicit declaration of function ‘wcwidth’
readline.c:1078: warning: ‘reset_default_bindings’ defined but not used
tilde.c: In function ‘tilde_expand’:
tilde.c:199: warning: suggest parentheses around assignment used as truth
value
tparam.c: In function ‘memory_out’:
tparam.c:51: warning: implicit declaration of function ‘write’
undo.c: In function ‘_rl_copy_undo_list’:
undo.c:140: warning: ‘roving’ may be used uninitialized in this function
version.c:2: warning: ‘version_string’ defined but not used
binrestart.F90:110.8:
if (NC_defineRemdIndices(ncid, remd_dimension, remd_indices_var_id,&
1
Error: Missing actual argument for argument 'ismremd' at (1)
make[3]: *** [binrestart.o] Error 1
make[2]: *** [parallel] Error 2
make[1]: *** [parallel] Error 2
make: *** [install] Error 2
>
> (b) What OS are you using? What version of compilers ("gcc --version")?
>
lsb_release -a
LSB Version:
:core-4.0-amd64:core-4.0-noarch:graphics-4.0-amd64:graphics-4.0-noarch:printing-4.0-amd64:printing-4.0-noarch
Distributor ID: CentOS
Description: CentOS release 6.2 (Final)
Release: 6.2
Codename: Final
--------------------------------------------------------------------------------------------------------------------------------------
gcc --version
gcc (GCC) 4.4.6 20110731 (Red Hat 4.4.6-3)
Copyright (C) 2010 Free Software Foundation, Inc.
----------------------------------------------------------------------------------------------------------------------------------------
mpicc -show
gcc -ldl -I/opt/intel/impi/4.1.0.024/intel64/include -L/opt/intel/impi/
4.1.0.024/intel64/lib -Xlinker --enable-new-dtags -Xlinker -rpath -Xlinker
/opt/intel/impi/4.1.0.024/intel64/lib -Xlinker -rpath -Xlinker
/opt/intel/mpi-rt/4.1 -lmpi -lmpigf -lmpigi -lrt -lpthread
Thank you so much for your time.
Sincerely,
Sunita
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Received on Wed Oct 09 2019 - 05:00:02 PDT
