Custom Search
-- Ray Luo, Ph.D. Professor of Structural Biology/Biochemistry/Biophysics, Chemical Physics, Biomedical Engineering, and Chemical Engineering Department of Molecular Biology and Biochemistry University of California, Irvine, CA 92697-3900 On Thu, Oct 3, 2019 at 4:37 PM Fanglue Ni <fangluen.uci.edu> wrote: > > Dear Researchers, > > I'm trying to install Amber19-with-patches on macOS mojave 10.14.6. I > installed the amber with ./configure gnu and it shows an error message: > > Obtaining the gnu compiler suite versions, e.g.: > gcc -v > The C version is 5.5.0 > The Fortran version is 5.5.0 > > Testing the gcc compiler: > gcc -fPIC -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o testp testp.c > In file included from testp.c:1:0: > /opt/local/lib/gcc5/gcc/x86_64-apple-darwin18/5.5.0/include-fixed/stdio.h:78:20: > fatal error: _stdio.h: No such file or directory > compilation terminated. > ./configure2: line 2439: ./testp: No such file or directory > Error: Unable to compile a C program using gcc -fPIC > -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE > Please check your compiler settings or configure flags. > > I installed the gcc5 as instruction on the official website. Does anyone > know how to deal with this? > > Thank you > Fanglue Ni > _______________________________________________ > AMBER mailing list > AMBER.ambermd.org > http://lists.ambermd.org/mailman/listinfo/amber _______________________________________________ AMBER mailing list AMBER.ambermd.org http://lists.ambermd.org/mailman/listinfo/amberReceived on Thu Oct 03 2019 - 17:00:02 PDT