[AMBER] Amber Installation Problem on Mac

From: Fanglue Ni <fangluen.uci.edu>
Date: Thu, 3 Oct 2019 16:35:23 -0700

Dear Researchers,

I'm trying to install Amber19-with-patches on macOS mojave 10.14.6. I
installed the amber with ./configure gnu and it shows an error message:

Obtaining the gnu compiler suite versions, e.g.:
     gcc -v
The C version is 5.5.0
The Fortran version is 5.5.0

Testing the gcc compiler:
     gcc -fPIC -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o testp testp.c
In file included from testp.c:1:0:
/opt/local/lib/gcc5/gcc/x86_64-apple-darwin18/5.5.0/include-fixed/stdio.h:78:20:
fatal error: _stdio.h: No such file or directory
compilation terminated.
./configure2: line 2439: ./testp: No such file or directory
Error: Unable to compile a C program using gcc -fPIC
 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
       Please check your compiler settings or configure flags.

I installed the gcc5 as instruction on the official website. Does anyone
know how to deal with this?

Thank you
Fanglue Ni
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Received on Thu Oct 03 2019 - 17:00:02 PDT
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