Date: Wed, 11 Sep 2019 15:52:35 +0530
Dear Sir/Ma'am
I am interested in PCA calculation for the my wild type protein. I had gone
through the tutorial (http://www.amber.utah.edu/AMBER-workshop/London-2015/
pca/) and prepared this cpptraj script.
My problem is that in 2D PC1 and PC2 image they have coming -250 to 70. I
am suspect that the projection on X axis is very negative.
Could you give me some comment why it showing negative or something i am
doing is wrong.
Best Regards
Aashish
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(image/png attachment: 2D.png)
(image/png attachment: eigen.png)
- application/octet-stream attachment: first.cpptraj
