On Tue, Jul 09, 2019, Anthony Bogetti wrote:
>Thank you both for the help. It turns out there are missing residues from
>the crystal structure that we didn't see when setting up the initial model.
Another suggestion to avoid this problem: always use pdb4amber to
process PDB files before submitting them to tleap. pdb4amber will
identify gaps in the structure.
That said: the tleap output should not have a <blank> when identifying
the long "bond". Scott: can you take a look at this?
....dac
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Jul 10 2019 - 10:00:02 PDT