On Thu, Jul 04, 2019, Rui Chen wrote:
>
>As you can see in the output file, I got warnings about improper torsions.
>How to solve the problem? Thank you.
You can ignore these messages. But note you got some additional
warnings about the diulfide bonds:
Checking Unit.
WARNING: There is a bond of 3.361144 angstroms between:
------- .R<CYX 16>.A<SG 8> and .R<CYX 82>.A<SG 8>
WARNING: There is a bond of 3.502353 angstroms between:
------- .R<CYX 128>.A<SG 8> and .R<CYX 182>.A<SG 8>
These problems will probably go away upon minimization, but, if they are
unexpected, you might want to investigate. Do you expect your structure
to have well-formed disulfide bonds with about a 2 Ang. bond length?
....dac
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Received on Fri Jul 05 2019 - 08:30:02 PDT
