[AMBER] ntt=9 in pmemd?

From: Kenneth Huang <kennethneltharion.gmail.com>
Date: Wed, 26 Jun 2019 16:07:04 -0400

Hi all,

A quick question- I remember the Nose-Hoover thermostat was implemented in
pmemd, but a test with my input at ntt=9 keeps throwing up an error message
of how ntt can only be 0,1,2, or 3. Is that actually the case, or did I
miss something up in the input?

 &cntrl
  imin = 0,
  irest = 1,
  ntx = 7,
  ntxo= 2,
  barostat = 1,
  pres0 = 1.0,
  ntp = 1,
  taup = 2.0,
  cut = 9.0,
  ntr = 0,
  ntc = 1,
  ntf = 1,
  tempi = 300,
  temp0 = 300,
  ntt = 9,
  gamma_ln = 1,
  ig=-1,
  iwrap=1,
  nstlim = 500000, dt = 0.008,
  ntpr = 75000, ntwx = 2000, ntwr = 150000,
 /


Best,

Kenneth

-- 
Ask yourselves, all of you, what power would hell have if those imprisoned
here could not dream of heaven?
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Received on Wed Jun 26 2019 - 13:30:02 PDT
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