[AMBER] Releasing SIRAH lipids! A complete coarse-grained force field running on AMBER

From: Matias Machado <mmachado.pasteur.edu.uy>
Date: Wed, 15 May 2019 15:30:57 -0300 (UYT)

Dear Amberites,

We are pleased to announce the release of SIRAH Lipids, a complete set of phospholipid parameters and libraries to run coarse-grained simulations of protein-membrane systems with AMBER and GROMACS.

You can access the preprint version of the manuscript at BioRxiv [https://doi.org/10.1101/627570]

The just released SIRAH package contains residue-based topologies for DMPC, DPPC, POPC, POPE, POPS and fragment-based topologies (Lipid11-17 style) for PC, PE, PS, MY, PL, OL.

Comprehensive mapping files were developed to easily convert most of the available all-atoms models to SIRAH.

SIRAH is an open source initiative for biomolecular simulations, you can download it and access tutorials for free at [http://www.sirahff.com]


Matías Machado

Researcher at Biomolecular Simulations Lab.
Institut Pasteur de Montevideo | Uruguay

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Received on Wed May 15 2019 - 12:00:02 PDT
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