Is pdb4amber supposed to be installed with the ambertools suite?
I've installed ambertools=18 via conda (I tried both from
http://ambermd.org/downloads/ambertools/conda and 'ambermd' channels), and whenever I try to use pdb4amber, I get the error message pasted below.
I thought pdb4amber used to work out of the box with conda installs. Did something change? I now have to install pdb4amber separately from git using pip.
Best,
Austin
Traceback (most recent call last):
File "/home/ajp1/miniconda3/envs/b-building/bin/pdb4amber", line 6, in <module>
from pkg_resources import load_entry_point
File "/home/ajp1/miniconda3/envs/b-building/lib/python3.7/site-packages/pkg_resources/__init__.py", line 3241, in <module>
._call_aside
File "/home/ajp1/miniconda3/envs/b-building/lib/python3.7/site-packages/pkg_resources/__init__.py", line 3225, in _call_aside
f(*args, **kwargs)
File "/home/ajp1/miniconda3/envs/b-building/lib/python3.7/site-packages/pkg_resources/__init__.py", line 3254, in _initialize_master_working_set
working_set = WorkingSet._build_master()
File "/home/ajp1/miniconda3/envs/b-building/lib/python3.7/site-packages/pkg_resources/__init__.py", line 583, in _build_master
ws.require(__requires__)
File "/home/ajp1/miniconda3/envs/b-building/lib/python3.7/site-packages/pkg_resources/__init__.py", line 900, in require
needed = self.resolve(parse_requirements(requirements))
File "/home/ajp1/miniconda3/envs/b-building/lib/python3.7/site-packages/pkg_resources/__init__.py", line 786, in resolve
raise DistributionNotFound(req, requirers)
pkg_resources.DistributionNotFound: The 'pdb4amber==1.6.dev0' distribution was not found and is required by the application
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Received on Fri Apr 12 2019 - 09:30:03 PDT
