Re: [AMBER] command from ambertools tutorial does not working

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Tue, 26 Feb 2019 12:41:38 -0500

What is the exact error message you receive?

-Dan

On Tue, Feb 26, 2019 at 12:29 PM Sasthi Charan Mandal
<sasthi.phys.gmail.com> wrote:
>
> Dear sir/madam,
> I am following the simulation of small fragment of DNA from
> ambertools tutorial. But I stuck on energy minimization step. the
> command : $AMBERHOME/bin/sander
> -O -i polyAT_vac_init_min.in -o polyAT_vac_init_min.out -c polyAT_vac.rst7
> -p polyAT_vac.prmtop -r polyAT_vac_init_min.ncrst is not working and it
> shows syntax error. Do I have to modify the command? could you please help
> me out of the problem?
> with regards
> Sasthi
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Received on Tue Feb 26 2019 - 10:00:02 PST
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