I could not find chamber executable in the bin directory after
installation. Can you please tell me whether my installation is right?
I have used Amber14 with AmberTools15. If it is correct, please suggest me
how to convert charmm formatted psf into amber
formatted prmtop and inpcrd file.
Thanks in advance,
Prabir
On Tue, Feb 5, 2019 at 10:52 PM Prabir Khatua <prabir07chem.gmail.com>
wrote:
> Thank you very much for your reply. I will use AmberTools18 as per your
> suggestions.
>
> Prabir
>
> On Mon, Feb 4, 2019 at 7:38 PM David Case <david.case.rutgers.edu> wrote:
>
>> On Tue, Feb 05, 2019, Prabir Khatua wrote:
>>
>> >make[2]: *** [install] Error 2
>> >make[2]: Leaving directory
>> >`/home/prabir/SOFTWARE/AMBER/amber14/AmberTools/src/reduce'
>>
>> This is only a problem if you intend to use the "reduce" program (to add
>> hydrogens to PDB files).
>>
>> In this particular case, if you need reduce, you can get it from its
>> original authors (via a Google search), or (better) upgrade to
>> AmberTools18. Especially for reduce, we have made a number of fixes to
>> allow the code to compiled with a wider variety of compilers.
>>
>> ...dac
>>
>>
>> _______________________________________________
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>> http://lists.ambermd.org/mailman/listinfo/amber
>>
> --
>
> *Prabir Khatua*
> *Postdoctoral Research Associate*
> *Department of Chemistry & Biochemistry*
> *University of Oklahoma*
> *Norman, Oklahoma 73019*
> *U. S. A.*
>
>
>
>
>
>
>
>
>
>
--
*Prabir Khatua*
*Postdoctoral Research Associate*
*Department of Chemistry & Biochemistry*
*University of Oklahoma*
*Norman, Oklahoma 73019*
*U. S. A.*
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Received on Wed Feb 06 2019 - 12:00:02 PST
