Re: [AMBER] simple minimization error of a acetonitrile molecule in water (TIP3P water)

From: David A Case <david.case.rutgers.edu>
Date: Mon, 28 Jan 2019 07:57:05 -0500

On Fri, Jan 25, 2019, Debarati DasGupta wrote:

>sander -O -i min_all.in -o allmin.out -p C3N_WAT.prmtop -c C3N_WAT.inpcrd
>-r allmin.rst -x allmin.crd -ref C3N_WAT.inpcrd

It would be good to post the actual files (prmtop, inpcrd and
min_all.in) that one would need to reproduce the above problem. You
seem to have provided a bunch of other files, but that just increases
the chances of miscommunication about where the real problem lies.

...thx...dac


_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Jan 28 2019 - 05:00:04 PST
Custom Search