Ambpdb is not a file to be created but a program to create a PDB file from prmtop and rst/inpcrd.
The image you have attached depicts the command to use this program.
Best Regards
Elvis A F Martis
Molecular Simulations Group,
Department of Pharmaceutical Chemistry,
Bombay College of Pharmacy,
Kalina, Santacruz [E],
Mumbai 400098,
INDIA.
Institute Web-address: www.bcp.edu.in
Research Group Web-address: www.profeccoutinho.net.in
Personal Web-address: www.elvismartis.in
________________________________________
From: Charu Sharma (JRF) <charu.sharma.lnmiit.ac.in>
Sent: 18 November 2018 14:52
To: amber-subscribe.ambermd.org; AMBER.ambermd.org
Subject: [AMBER] regarding ambpdb
Dear all amber user,
i want to know in B1 tutorial how we create *ambpdb file* ?
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sun Nov 18 2018 - 03:30:02 PST
